Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEAT-WLHEASAGTLNYEDVLYPVESVLKKDKVNFV-QAEVTKIDRDAKKVETN---QG-IYDFDILVVALGFVSETFGIEGMK-DHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPM-FSEELVNHAVSYLEDRGVEFKIATPIVACNEK--GFVV-EVDGEKQQLNAGTSVWAAGVRGSKLMEESFEG-VKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEER-PLPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHDGVGMVFGKPIAGKKAAFMKKVIDTRAVFKIGGIGLAFKKGKF |
| 3OC4 Chain:A ((3-314)) | -----LKIVIIGASFAGISAAIASRKKY--PQAEISLIDKQATVGYLSG--------------RYITEE-ELRRQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLS----AVPL--------------LENSQTVAVIGAGPIGMEAIDFLVKM-------------KKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETS--E-QEISCDSGIFALNLHPQLAYLDKKIQRNLDQTIAVDAYLQT-SVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEK------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183298 for 2221 contacts (-82.5/contact) +
2D Compatibility (PS) -29472 + (NN) -1551 + (LL) 6592
1D Compatibility (HY) -15200 + (ID) 3150
Total energy: -226079.0 ( -101.79 by residue)
QMean score : 0.444
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