Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLQTTYPSNNYPIFVEHGAIDHISTYI--DQFDQSFILIDEHVNQ----YFADKFDDILSYENVHKVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFVAATLLRGVHFIQVPTTIL-AHDSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFEQILSGYAEVYKHALLNGESTTQEIEQHFKDREILQSLNGMDKYIAKGIETKLDIVVAD--EKEQGVRKFLNLGHTFGHAVEYNHK--IAHGHAVMIGIIYQFIVANIL-FNSNHDIQHYINYLTKLGYPLETITDIDFETIYQYMLSDKKNDKQGVQMVLIKHFGDIVVQHIDQTTLQHACEQLKTYFK |
| 2GRU Chain:B ((17-342)) | --------------FGEH-VLESVESYIPRDEFDQYIMISDSGVPDSIVHYAAEYFGKLAP---VHILRFQGGEEYKTLSTVTNLQERAIALGANRRTAIVAVGGGLTGNVAGVAAGMMFRGIALIHVPTTFLAASDSVLSIKQAVNLTSGKNLVGFYYPPRFVFADTRILSESPPRQVKAGMCELVKNMLIL-ENDNKEFTEDDLNSANVYSPKQLETFINFCISAKMSVLSEDIYEKKKGL--IFEYGHTIGHAIELAEQGGITHGEAIAVGMIYAAKIANRMNLMPEHDVSAHYWLLNKIGALQDIPLKSDPDSIFHYLIHDN--DEDNLGMILLSGVG------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218518 for 2585 contacts (-84.5/contact) +
2D Compatibility (PS) -31905 + (NN) -2392 + (LL) 2884
1D Compatibility (HY) -23600 + (ID) 5150
Total energy: -278681.0 ( -107.81 by residue)
QMean score : 0.427
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