Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKVIGLTGGIASGKSTVSELLSVFGFKVVDADKAAREAVKKGSKGLAQVREVFGDEAIDENGEMNRRYMGDLVFNHPEKRLELNAIIHPIVRDIMEEEKQEYLKQGYN-VIMDIPLLFENELENTVDEVWVVYTSESIQMDRLMQRNNLSLEDAKARVYSQISIDKKSRMADHVIDNLGDKLELKQNLERLLEEEGYIEKPNYGEED
1UF9 Chain:A ((7-196))
HPIIIGITGNIGSGKSTVAALLRSWGYPVLDLDALAARARENKE---EELKRLFPEAV--VGGRLDRRALARLVFSDPERLKALEAVVHPEVRRLLMEELSR---LEAPLVFLEIPLLFEKGWEGRLHGTLLVAAPLEERVRRVMARSGLSREEVLARERAQMPEEEKRKRATWVLENTGSLEDLERALKAVLAELTG----------
General information:
TITO was launched using:
RESULT:
Template:
1UF9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45015 for 1392 contacts (-32.3/contact) +
2D Compatibility (PS) -21252 + (NN) -10538 + (LL) 732
1D Compatibility (HY) -12000 + (ID) 3200
Total energy: -91273.0 ( -65.57 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_1UF9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UF9-query.scw
PDB file :
Tito_Scwrl_1UF9.pdb
: