Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWKEKVQQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVD------HIAGRIEA-GKGNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEESDWKCTDRYFKTEEMPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEARVLVKENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGM-DPSIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFNSDFGEKMGMKFHTDVMGDVTTNIGVITYDNENAGLFGINLRYPEGFEFEKAMDRFANEIQQY---GFEVKLG--KVQPPHYVDK-NDPFVQKLVTAYRNQTNDMTEPYTIGGGTYARNL-DKGVAFG-AMFSDSEDLMHQ-KNEYITKKQLFNATSIYLEAIYSLCVEE |
| 1CG2 Chain:A ((10-392)) | -LFQAATDEQPAVIKTLEKLVNIETGTGDA---------EGIAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGRGGKNLLLMSHMDTVYLKGILAKAPFR--VEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGSFGSRDLIQEEA-----K--LADY-VLSFE------------------------------------PTSAG----D----EKL--------------SLGTSGIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNIDDKA-----------------------KNLRFNWTIAKAGNVSNIIPASATLNADVRYARNEDFDAAMKTLEERAQQKKLPEADVKVIVTRGRPAFNAGEGGKKLVDKAVAYYKEAGGTLGVEERTGGGTDAAYAALSGKPVIESLGLPG-FGYHSDKAEYVDISAIPRRLYMAARLIMDLGAG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112333 for 3132 contacts (-35.9/contact) +
2D Compatibility (PS) -38978 + (NN) -7013 + (LL) 6640
1D Compatibility (HY) -4800 + (ID) 3850
Total energy: -160334.0 ( -51.19 by residue)
QMean score : 0.362
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