Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQIE-------KLRGAALDELFDAILTLENREECYQFFDDLCTVNEIQSLSQRLQVAKMIKQGYTYATIEQESGASTATISRVKRSLQWGNDAYTMILDRMNIETNE-
3WX4 Chain:A ((1-98))
MIIDSQSVVQYTFKIDILEKLYKF-LPNLYHSIVNELVEELHLENNDFLIGTY---KDLSKAGYFYVIPAPGK-----NIDDVLKTIMIYVHDYE-IEDYFELEHHHH
General information:
TITO was launched using:
RESULT:
Template:
3WX4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4498 for 556 contacts (-8.1/contact) +
2D Compatibility (PS) -9208 + (NN) 1407 + (LL) 1040
1D Compatibility (HY) -6000 + (ID) 850
Total energy: -18109.0 ( -32.57 by residue)
QMean score : 0.298
(partial model without unconserved sides chains):
PDB file :
Tito_3WX4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WX4-query.scw
PDB file :
Tito_Scwrl_3WX4.pdb
: