Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQLYYLGPKGTFSYLACRQYFSENEATFQPKSNLFEVIKAVADDDTSIGVVPIENSIEGTINIVADALAQQDVFAHGEIRLDINFALYGNGTDSISDIKKVYSIAPAISQTTNYIHQHQFDYDYVDSTIQSLTKIENGVAAIAPLGSGEAYGFTPIDTHIEDYPHNVTRFLVIKNQQQFDQNATS---LMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQADSAITTDIKKVIAILE-TLDFKVEMIGAFN-- |
1PHZ Chain:A ((19-121)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GQETSYIEDNSNQNGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYLDKRTKPVLGSIIKSLRNDIGATVHELSRDKEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PHZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79451 for 559 contacts (-142.1/contact) +
2D Compatibility (PS) -9756 + (NN) -1588 + (LL) 11000
1D Compatibility (HY) -2800 + (ID) 1150
Total energy: -83745.0 ( -149.81 by residue)
QMean score : 0.529
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