Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNAIELSNVNYSS-DQFNLKNISFKVPQGFVTGFIGRNGAGKTTIIRLIMDLYQPQTGVIRVLEEDMALNP-I-ELKNSIGFVYSENYFNERWTTKQLEKMIAPFYRK--WDHQVFEFYLEKFD-LP--INKSIKTFSTGMKMKLSLAVAFSHHAELYIFDEPTSGLDPLARNELLEIIQQELIDENKTIFMSTHIISDLEKIADYIIHLSDGEVILNGSKEQLLQRYQVVSGATEDLDDELASLLIYEEHKRTGFIGLTEHAQVFKEILGHKVNITTPSIENLMVYLEKRKPKYHENIKLMEEGF |
| 1JI0 Chain:A ((5-230)) | -IVLEVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINRMGIALVPEGRRIFPELTVYENLMMGAYNRKDKEGIKRDLEWIFSLFPRLKERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEVFEVIQKINQ-EGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDNE------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JI0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136244 for 1765 contacts (-77.2/contact) +
2D Compatibility (PS) -24010 + (NN) -11859 + (LL) 6196
1D Compatibility (HY) -11200 + (ID) 2950
Total energy: -180067.0 ( -102.02 by residue)
QMean score : 0.526
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