Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTILANTRKFKEAMFLKGFNLSDLSRETGVGISYLSQIINGK------KIPSPKLAKKMAEVLQVEVNELFEFEVKEA
3FYM Chain:A ((2-73))
---KTVGEALKGRRERLGMTLTELEQRTGIKREMLVHIENNEFDQLPNKNYSEGFIRKYASVVNIEPNQLIQAHQ---
General information:
TITO was launched using:
RESULT:
Template:
3FYM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25187 for 448 contacts (-56.2/contact) +
2D Compatibility (PS) -7137 + (NN) -1559 + (LL) 776
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -35957.0 ( -80.26 by residue)
QMean score : 0.643
(partial model without unconserved sides chains):
PDB file :
Tito_3FYM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FYM-query.scw
PDB file :
Tito_Scwrl_3FYM.pdb
: