Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVKVANKYAKALFDVSLDTNNLETINEELTVINEAVKDKIEQLKMVDSNPTQTAEQRRELINGVFTDINPYIKNMMYVLADNRHISLIADVFKA-FQSLYNGHYNQDFATIESTYELSQEELDKIVKLVTQQTKLSKVIVDTKINPDLIGGFRVKVGTTVLDGSVRNDLVQLQRKFRRVN--------------- |
| 1PIE Chain:A ((29-416)) | TVLSALTEKFAEVFGDTKEVEYFFSPGRINLIGEHTDYNGGYVFPASITIGTTGLARLREDKKVKLYSENFPKLGVIEFDLDEVEKKDGELWSNYVKGMIVMLKGAGYEIDKGFELLIKGEIPTASGLSSSASLELLVGVVLDDLFNLNVPRLELVQLGQKTENDYIGVNSGILDQFAIGFGEVKKAIELDCNTLKYEMVPVELRDYDIVIMNTNKPR-------ALTESKYNERFAETREALKRMQTRLDIQSLGELSNEEFDANTDLIGD------ETLIKRARHAVYENNRTKIAQKAFVAGNLTKFGELLNASHASLKDDYEVTGLELDTLAETAQKQAG----VLGARMTGAGFGGCAIALVAHDNVSAFRKAVGQVYEEVVGYPASFYVAQIGSGSTKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PIE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13856 for 1232 contacts (-11.2/contact) +
2D Compatibility (PS) -16402 + (NN) 2726 + (LL) 1512
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -29370.0 ( -23.84 by residue)
QMean score : 0.358
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