Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMEVCPYLEETFKILGRSWNGLIINYLSRCNDCSAHFSDMKRDLKT--------ITPRALSLKLSELAQWELVEKQIISTSPVQIIYVLTEKGKALAEALHP-IEAWAQSYVDLTDQRTAK
3F8B Chain:A ((5-109))
----------PKEMLRAQTNVILLNVLK-Q--GDNYVYGIIKQV-KEASNGEMELNEATLYTIFKRLEKDGIISSYWGD--GRRKYYRLTEIGHENMRLAFESWSRVDKIIENLEAN----
General information:
TITO was launched using:
RESULT:
Template:
3F8B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44300 for 537 contacts (-82.5/contact) +
2D Compatibility (PS) -10237 + (NN) -5444 + (LL) 1496
1D Compatibility (HY) -4400 + (ID) 600
Total energy: -63485.0 ( -118.22 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_3F8B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F8B-query.scw
PDB file :
Tito_Scwrl_3F8B.pdb
: