Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKSFVTATLALGLLSTVGAALPSHEASADSNNGYKELTMDGKHTVPYTISVDGITALHRTYFVFPENKKVLYQEIDSKVKNELASQRGVTTEKINNAQTATYTLTLNDGNKKVVNLK--------KN---DDAKNSIDPSTIKQIQIVVK
1ET9 Chain:A ((100-203))
--------------------------------------------IKVPVNVWDKSKQQP--PMFITVNKPKVTAQEVDIKVRKLLIKKYDIYNNREQKYSKGTVTLDLNSGKDIVFDLYYFGNGDFNSMLKIYSNNERIDSTQF-HVDVSI-
General information:
TITO was launched using:
RESULT:
Template:
1ET9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39866 for 609 contacts (-65.5/contact) +
2D Compatibility (PS) -10108 + (NN) -1070 + (LL) 2828
1D Compatibility (HY) -5600 + (ID) 1050
Total energy: -54866.0 ( -90.09 by residue)
QMean score : 0.634
(partial model without unconserved sides chains):
PDB file :
Tito_1ET9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ET9-query.scw
PDB file :
Tito_Scwrl_1ET9.pdb
: