Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKIENEIVNKTYLAINSLEELRNMIGIKSDYFYKC----LYVNDHFYNVIKIPKRKKDEYRELMIPNMALKNIQRWILDNVLYRRQVHKCATGFVPRKSI---VNNAIPHVGQK-YILKMDIENFFPSITFK-QVRKIFSEMG----YKFELATALAN------------LCTVNNQLPQGAPTSPYIANIIF-------------YNIDKR-----IFSYCQKNNLRYTRYADDITISGSNKVSFSKEIIREIVNQYNFRINESKTI------------MFKPGDRKKVTG--IIVNEKISVPKTLIREVRK--------QIYFVNKFGLEEHL---IRNNYS-------------LDYEQQFIMSIYGKISFI-KMIDFKKGVSLQKKFNEVLGNIES----SNMYRDNIDF--DDIELHWIN---------------------- |
| 4ZFV Chain:A ((10-445)) | ------NVLDFTVLGLNSGTSMDGIDCALCHFYQKTPDAPMEFELLEYGEVPLAQPIKQRVMRMILEDT--TSPSELSEVNVILGEHFADAVRQFAAERNVDLSTIDAIASHGQTIWLLSMPEEGQVKSALTMAEGAILASRTGITSITDFRISDQAAGRQGAPLIAFFDALLLHHPTKLRACQNIGGIANVCFIPPDVDGRRTDEYYDFDTGPGNVFIDAVVRHFTNGEQEYDKDGAMGKRGKVD--QELVDDFLKMPYFQLDPPKTTGREVFRDTLAHDLIRRAEAKGLSPDDIVATTTRITAQAIVDHYRRYAPSQEIDEIFMCGGGAYNPNIVEFIQQSYPNTKIMMLDEAGVPAGAKEAITFAWQGMEALVGRSIPVPTRVETRQHY--VLGKVSPGLNYRSVMKKGMAFGGDAQQLPWVSEMIVKKKGKVITNNWAGSHHHH |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4ZFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -75048 for 2517 contacts (-29.8/contact) +
2D Compatibility (PS) -33887 + (NN) 3046 + (LL) 1052
1D Compatibility (HY) -17200 + (ID) 2700
Total energy: -124737.0 ( -49.56 by residue)
QMean score : 0.149
|
|
|