Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKK-GFLLDGFPRTIEQAEALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDVTKDVIDILDHL
4W5H Chain:A ((6-216))
MNLLIMGLPGAGKGTQAAKIVEQFHVAHISTGDMFRAAMANQTEMGVLAKSYIDKGELVPDEVTNGIVKERLSQDDIKETGFLLDGYPRTIEQAHALDKTLAELGIELEGIINIEVNPDSLLERLSGRIIHRVTGETFH-----P-----VDYKEEDYYQREDDKPETVKRRLDVNIAQGEPIIAHYRAKGLVHDIEGNQDINDVFSDIEKVLTNL
General information:
TITO was launched using:
RESULT:
Template:
4W5H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77813 for 1477 contacts (-52.7/contact) +
2D Compatibility (PS) -22446 + (NN) -11669 + (LL) 672
1D Compatibility (HY) -22000 + (ID) 5850
Total energy: -139106.0 ( -94.18 by residue)
QMean score : 0.587
(partial model without unconserved sides chains):
PDB file :
Tito_4W5H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4W5H-query.scw
PDB file :
Tito_Scwrl_4W5H.pdb
: