Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIGIDKINFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTEMAVSPVNQDIVSMGANAAKDIIT--DEDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDTARYGLN---SGGEPTQGAGAVAMVIAHNPSILALNE----DAVAYTEDVYDFW----RPTGHKY---PLVDGALSKDAYIRSFQQSWNEYAKRQGKSLADFASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLENRDLQAGETIGLFSYGSGSVGEFYSATLVEGYKDHLDQAAHKALLNNRTEVSVDAYETFFKRFDDVEFDEEQDAVHEDRHIFYLSNIENNVREYHRPE |
| 1UB7 Chain:A ((2-321)) | --SGILALGAYVPERVMTNADFEAYLDTSDEWIVTRTGIKERRVAAEDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGLK--AFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALSKIIDWNDRATAVLFGDGGGAAVVGKVREGYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRIIDAARERLGLPW---------ERVAV---NVDRYGNTSTASIPLALKEAVDAGRIREGDHVLLVSFGAGLTWAAAVLTWGG-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179215 for 2855 contacts (-62.8/contact) +
2D Compatibility (PS) -33001 + (NN) -12638 + (LL) 5880
1D Compatibility (HY) -4800 + (ID) 2600
Total energy: -226374.0 ( -79.29 by residue)
QMean score : 0.481
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