Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKT-----ITYYTVPH-AP-AQDI-VVKGYE-DVTNTFDVIIIAVKTHQLDAVIPHLTYLAHEDTLIILAQNGYGQLEHIPFK-N---VCQAVVYISGQKKGDVVTHFR-DYQLRIQDNAL-----TRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSITALGRQT-VAIM-HNPEIRILCRQLLLDGCRVAQAEGLNFSEQTVDTIMTIYQGYPDEMGTSMYYDIVHQQPLEVEAIQGFIYRRAREHNLDTPYLDTIYSFLRAYQQNM |
3I83 Chain:A ((3-304)) | -LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDYETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIKVVEGADRVGLLRDAVAPDTGIVLISNGIDIEPEVAAAFPDNEVISGLAFIGVTRTAPGEIWHQAYGRLMLGNYPGGVSERVKTLAAAFEEAGIDGIATENITTARWQKCVWNAAFNPLSVLSGGLDTLDILSTQ--EGFVRAIMQEIRAVAAANGHPLPEDIVEKNVAST-YKMPPYKTSMLVDFEAGQPMETEVILGNAVRAGRRTRVAIPHLESVYALMKLLELR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224474 for 2321 contacts (-96.7/contact) +
2D Compatibility (PS) -30260 + (NN) -5858 + (LL) 844
1D Compatibility (HY) -8800 + (ID) 2650
Total energy: -271198.0 ( -116.85 by residue)
QMean score : 0.496
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