Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MKEKFDLVKLLNILKKNIKLLLILPAICLVV--------STALTFFVMPDKYTASTQILVNMKKSSSD-----LAFQNVQS-------------------SLQSVNTYTEIIKSPRILDKVSREFDGQYSTAELNSFLKVTNQTNSQIITVS------------------------VTTGNK--SESDKIVNRISKVFAHDMPKIM-------SVDNVTILSSAHDNAVK--VSPIVSVNLVISIIVGI----VLAILIIFLKELLDKRIKTEEDVES-QLGLPILGSIQKF |
| 4RHJ Chain:A ((19-318)) | SHMFSKF-LMNVKGVTPRGSDWANRLGPVALFGYGAGMPRRAPLLDFFLQSPRDCDHYAELTIHDKGPIECPPETVMFMPVLNCGQMLDEAAGTETPTSDEWYLGSLEASTELLEKG--YVPVSVGGDGSATLSMVEAYKRLFPSDDIVIVHFSARPSVSDPRSPLRVLLDKGLLKGVVSVGNRQVSSEDRKVRKLHKMFYMDMRDIRNDYPVFISID-ASVLDPAFAPAVDSPVAGGLSTRDLLHIMNGIRGPKVVGIDVYGYNPDLDVYRKDNVGLTAIALSKIIKEGILK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79328 for 1622 contacts (-48.9/contact) +
2D Compatibility (PS) -22217 + (NN) 1571 + (LL) 280
1D Compatibility (HY) -12000 + (ID) 2700
Total energy: -114394.0 ( -70.53 by residue)
QMean score : 0.149
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