Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQEFLGFGVVGNFAGHLEQAGESHSFINMKSEEKDAPKGLFPFYIPYE-NCYLGRCCINNHKIILPSDPDLRVQAEPEIALECDVKYDE--KHLVTKLVPNFFMAFNDASVRN-LEAT-KLSQKKNFSPASKGIGQKLPIDRFVYGGVCNNFSIASFLKYDNVWHIYGENSKLLKYEFFYQKLLDWIKNQLNHQQDGDSLEALRPFLERHNFPTKMIFAIGATPYMPFAQEHFLQKGDEVVIVAYNHLQYSFEKIQNLLEEDALQTKEHANLSYVYQIVE |
3RR6 Chain:A ((67-250)) | -----VVAMGKNYAAHAAEMGG------------DPP--ESPVIFIKPNTSIIG----PGLPIQLPP-SATEVHHEGELAIVIGRPCKDVPAARAAENI-LGYTIGNDVSARDHQRADGQWTRAKGH-DTFCPLGPWIVTD-L----DPADLEIRTE--VNGQVRQRSRT---SLLLHDVGAIVEWVSAV-------------------MTLLPGDVILTGTP-----EGVGPIVDGDTVSVTIEGIGTLSNPVVRK----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RR6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85615 for 1395 contacts (-61.4/contact) +
2D Compatibility (PS) -18847 + (NN) -1551 + (LL) 5308
1D Compatibility (HY) -1600 + (ID) 1450
Total energy: -103755.0 ( -74.38 by residue)
QMean score : 0.268
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