Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNILFGISDTQECYNAIKFAVKLAHSLKEVRFTLLHVSMEVFIYSESGMMDYGQTEALEEEKAKALLKQFEDAFKKENIECESVLKSGDLIDVVLDMAKDYDLLLIGASESNLLYRLFISHQNSLVEQSSIPVVIAK
3AB8 Chain:A ((155-268))
EGALLGYDASESAVRALHALAPLARAL-GLGVRVVSVHEDPARA-------E-----AWALEA-------EAYLRDHGVEASALVLGGDAADHLLRLQGPGDLLALGAP---VRRLVFGSTAERVIRNAQGPVLTAR
General information:
TITO was launched using:
RESULT:
Template:
3AB8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103119 for 915 contacts (-112.7/contact) +
2D Compatibility (PS) -12289 + (NN) -3919 + (LL) 1400
1D Compatibility (HY) -2400 + (ID) 1200
Total energy: -121527.0 ( -132.82 by residue)
QMean score : 0.432
(partial model without unconserved sides chains):
PDB file :
Tito_3AB8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AB8-query.scw
PDB file :
Tito_Scwrl_3AB8.pdb
: