Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MNYWTKLSIEYANQRSYLDDLFQVYPTIPE--GLREIDSKIWSNVEYHFKR---KDNLALITELLNLDLFPI--KDSYMAYLKRDKSAL------ERNPRTINRICGRLYEMG--------LNKIFEKCSEPK-------ETNRQIGPMFKDWINN--------------KSLGVEPVDLNDFIANENDAILKASDNV-MAEFAKSHLNYHHHKGLDFVAR--FNKKYIIGEAKFLTDFGGHQNAQFNDAINTIE----TPNIKAIKVAILDGVLYIESNNKMRKLLDTTYRNYHIMSALVLREFLYQI-------------------------------- |
| 3ZPJ Chain:A ((1-356)) | MTTLEEINLLVERGYYEEALAKVYEIEDPIEQVQVLTKIVVTIYQHDGPMEWIPSIMEDAMYIAKKLRDPANKAVAYSIIASTLAIMEYEEDAMDFFNRAIDEANEIESPIEKGMVLSTLAYHLAIAGYPDNALEIFNIAFDTIIGAETSYTHKVDGILRIGDLLEKAGDTLPSNEAMDFYKMAFDIFDKLHVNQRAAIVEKKIELAKTVYDVGLPQIRAALLKGKNHYALAIIKKKYSGVMRLIGELEVALWMKRVNNMEYLDVVDKAFECCESPRFTDVNVQHIARLLTELGNLRRALKFAKEIQNIHKRSEALKAIALELVRRKKFEEVKKIIESIPDPKIREEALNEIGTIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53339 for 1933 contacts (-27.6/contact) +
2D Compatibility (PS) -27190 + (NN) -8485 + (LL) 0
1D Compatibility (HY) -7200 + (ID) 2000
Total energy: -98214.0 ( -50.81 by residue)
QMean score : 0.376
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