Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFKVVQICGGLGNQMFQYAFAKSLQKHSNTPVLLDITSFDGSNRKMQLELFPIDLPYASAKEIAIAKMQHLPKLVRDALKYMGFDRVSQEIVFEYEPKLLKPSRLTYFYGYFQDPRYFDAISSLIKQTFTLPPPPENGNNKKKEEEYHRKLSLILAAKNSVFAHIRRGDYVGIGCQLGIDYQKKAVEYMAKRVPNMELFVFCEDLKFTQNLDLGYPFMDMTTRDKDEEAYWDMLLMQSCKHGIIANSTYSWWAAYLINNPGKIIIGPKHWLFGHENILCKEWVKIESHFEVKSQKYNA |
| 2OCC Chain:C ((1-261)) | -----------MTHQTHAY----HMVNPSPWPLTGALSALLMTSGLTMWFHFNSMTLLMIGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWA-FYHSSLAPTPELGGCWPPT---GIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEG--------DRKHMLQALFITITLGVYFTLLQASEYYE-----APF------TISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAGAWYWHFVDVVWLFLYVSIYWWGS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OCC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -703 for 1861 contacts (-0.4/contact) +
2D Compatibility (PS) -27415 + (NN) -11433 + (LL) 2104
1D Compatibility (HY) -8000 + (ID) 1600
Total energy: -47047.0 ( -25.28 by residue)
QMean score : 0.130
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