Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKVSVITACFNSE-KTIEDTILSVLNQTYK--NIEYIIIDGASADST-LEIIQKYKD---RIACVMSEKDEGIYDAMNKGIKRSSGDIIALLNSDDFYKDEFVVEKVVHEFENKNCDSVYGDLGVVKPDCLEKVVR--YYESGEF-------------------SPKTLLYGVVPAHPTLFVKKAIYERYGLYKTDYKI--SADFEMIIRLFVVQKISFSYLKEVLVIMRTGGVSASGFKSLLLRNKENLRACQENGIQANVFSMLLKYPRKIMGLFKRESKGSLKRND |
| 2D7I Chain:A ((111-341)) | LPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKREGLIRTRMLGASVATGDVITFLDSHCEANVN-WLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDP-FESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWM-CGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQRRPEYRHLSAGDVAVQKKLRSSL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D7I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124781 for 1639 contacts (-76.1/contact) +
2D Compatibility (PS) -22419 + (NN) -12557 + (LL) 500
1D Compatibility (HY) -9600 + (ID) 1700
Total energy: -170557.0 ( -104.06 by residue)
QMean score : 0.387
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