Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLNMNTHTRGIDSGLIHSLQSISLSMFRKGFFGLYQGSISARIGANQFVINKRNAVFDQLNENTLLVLHDKIDYRWKEASLDSPIHASVYREFLDAKFIAYARPPYSLAYSLRHNRLLPRDYLGYRSLGEEIAIFNPKDYDSWQERADTEILRQLQESKKYFVFI--KGCGIFAYHRELSKLMEVFDLIENSCKVLRLGDLMDYCYNDDPRLSV |
2EEE Chain:A ((1-149)) | --GSSGSSGG-------------------SRITYVKGDLFACPKTDSLAHCISEDC--RMGAGIAVLFKKKFGGVQELLNQQKKSGEVAVLKRDGRYIYYLITKKRA----------------------------SHKPTYENLQKSLEAMKSHCLKNGVTDLSMPRIGCGLDRLQWENVSAMIEEVFEATDIKITVYTL-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EEE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21783 for 1053 contacts (-20.7/contact) +
2D Compatibility (PS) -16086 + (NN) -6167 + (LL) 4592
1D Compatibility (HY) 0 + (ID) 550
Total energy: -39994.0 ( -37.98 by residue)
QMean score : 0.211
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