Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKENLPIVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETLISTIQNALNNLTTPIDVLTITANGEPTLY---PHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQAL-KEFDIVKFSLDAIDLKAFERVDKPYSKDINKILEGILSFSQIYQGQLVAEVLLIKG----VNDSANNLKLIADFLKKINTARVDLSTIDRPSSFKAPKLSEDELLKCSLFFEGLCVSLPKRSTAQAKKLVSCGIDELLALISRRPLSAEEAPLILDPNAFKHLETLLNHKQITIKKVGSLEFYCAF |
2FTP Chain:A ((26-178)) | -----------------------------------------------------PIEVADKIRLVDDLSA---AGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQR-PGVTYAALAPN----LKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQH-QVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVFDSSVAGLGGCPYAKGATGNVASEDVLYLLNGLEIHTGVDMHALVDAG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FTP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80812 for 1076 contacts (-75.1/contact) +
2D Compatibility (PS) -15573 + (NN) -4796 + (LL) 3824
1D Compatibility (HY) -6800 + (ID) 1050
Total energy: -105207.0 ( -97.78 by residue)
QMean score : 0.580
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