Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASFSILSIFKIGVGPSSSHTIGPMEAGARFCGLLKGILEQVERVQITLHGSLALTGKGHLSDEAVLIGLHGIYANELDITTKKALLHEAFENKVLKLANQHH--IPFDYAKDLIFDNKPLARHQNA----LILKAFNAKNEVLKEETYYSVGGGFVYTEKELDNLSEEGENESVAYDFSSAKELLELCQKHQKSIAEIVRLRENALKNHPDATMTKIYHAMLECYHNGANSKERYLPGSLKVTRLAPSVKTRLEKHPTSGKDPLA-LIDYISLYARSIAEENASGGKVVTAPTNGACAVVPSVLSYAKNHLFENLSQKS---INDFLLTSAAIGYLYKKNASLSGAEAGCQAEIGVASS-MAAGGLAHLC-QATTQQVLIASEIAMEHHLGLTCDPVGGLVQIPCIERNVLGAIKAISASKLALEDEYKPKVSLDEVIATMYATGKDMNEKYKETSLGGLAK-TLKC |
| 4OOU Chain:A ((20-383)) | -SEFLKAS--------GSNFYYGGQKV------FLSG-------VNFAWRSYGSDFGNGQYASNGPALKDWINKVKASGGNTARVWVH--VEGQVSPAFDSHGFVTSTDSKKTLINDLSDLLDYANGQNVFLILVLFNGALQ----------------------------NNSNVQNLFWDESKLNSYINN---ALTPMV----NALKSKPSLAAWEVLNEPEGTLQPGSDQNSCYDTSTLAAQGAGWG----------GKKFPMKQILKTINWISSAIHNADSKALVTVGSWSELTQTDSFGYRNHYKDSCLTGAGGKSNGIINFYQMHTYSHSGKWNQNAPFKVN----RWAYNVNDKPLLIGEFASVCSQNEGIQNLYKYAYNNGYNGALTWQFNSGG---DC----------------------------SDTYSNQMYGMQALKGQNDQSGGKGGMVSVNINH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OOU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84752 for 3168 contacts (-26.8/contact) +
2D Compatibility (PS) -36727 + (NN) -5057 + (LL) 7696
1D Compatibility (HY) -6800 + (ID) 3350
Total energy: -128990.0 ( -40.72 by residue)
QMean score : 0.237
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