Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKRLRRLRSSENLRAMVRETRLNINDFIAPLFVIESDSGIKNEISSMPGVYQMSIEPLLKECEELVGLGIKAVLLFG---IPKHKDATGSHALNKDHIVAKATREIKKRFKDLIVIADLCFCEYTDHGHCGIL-ENASVSNDKTLKILNLQGLILAESGVDILAPSNMMDGNVLSLRKALDKAGYFH-TPIMSYSTKFASSYYGPFRDVANSPPSFGDRKSYQMDYANQKEALLESLEDEKQGADILMVKPALAYLDIVKEIRDHTL-LPLALYNVSGEYAMLKLAQKHNLINYESVLLETMTCFKRAGADMIISYHAKEVANLLQRN |
1GJP Chain:A ((27-338)) | -------------LRQWQSERQLTKNMLIFPLFISDNPDDF-TEIDSLPNINRIGVNRLKDYLKPLVAKGLRSVILFGVPLIPGTKDPVGTAADDPAGPVIQGIKFIREYFPELYIICDVCLCEYTSHGHCGVLYDDGTINRERSVSRLAAVAVNYAKAGAHCVAPSDMIDGRIRDIKRGLINANLAHKTFVLSYAAKFSGNLYGPFRDAACSAPSNGDRKCYQLPPAGRGLARRALERDMSEGADGIIVKPSTFYLDIMRDASEICKDLPICAYHVSGEYAMLHAAAEKGVVDLKTIAFESHQGFLRAGARLIITYLAPEFLDWLDE- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1GJP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -186733 for 2668 contacts (-70.0/contact) +
2D Compatibility (PS) -33282 + (NN) -15188 + (LL) 1308
1D Compatibility (HY) -23600 + (ID) 5700
Total energy: -263195.0 ( -98.65 by residue)
QMean score : 0.627
|
|
|