Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPFSKFLENLTAPFKRIKNRSLVLALGFLILTFCLLLFLILSDVSRLISSKDFLYVIQSHPKQTLIEDENYFYANKGLYKTNKEAFLRVYKIPESMPIEKRESLSKVSKIFLALLFFISSMLFGIFWRLPKRLDTKMSLESAHKNELENAFQRYDALGVRFEDIAGVNEVKEELLEVIDYLKNPKKYQDLGIFLPKGVLLVGPPGVGKTMIAKALASEARVPFFYESGSAFSQIYVGAGAKKVHELFMHAKKHAPSIIFIDEIDALGKARGGHRSDEREATLNQLLTEMDGFLQNDEVVVIGATNQMEVMDEALLRSKRFDRRIFISLPDLLERQSILEKLLENKKHA--LDYLKIAKICVGFSGAMLATLINESALNALKHQRKEITHGDILEVKDKIAYGKKKPQTLDENQKELVALYQSAKALSAYWLEIE--FDKASLLGEFIAFN-ENKIHSESEIKNYIKVYLSGTIILELLYKER--YSLSKQDLQKAKFLNEFMASELLLAPTKESLSVLYEEQLEFLKPQIAACKRLSALLLEQECLEHANFYDLLNG |
| 4WW0 Chain:B ((15-372)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------VTFKDVAGIEEVKEEVKEIIEYLKDPVKFQKLGGRPPKGVLLYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETAKKHAPCMIFIDEIDAVGR-------DEREQTLNQLLVEMDGFDTSDGIIVIAATNRPDILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDLEFVARATPGLTGADLENLLNEAALLAARKGKEEITMEEIEEALDRI-------MTISPKEKEKIAIHEAGHALMGLVSDDDDKVHKISIIPRGMAL-EDKHIYDKKDLYNKILVLLGGRAAEEVFFGKDGITTGAENDLQRATDLAYRMVSMWGMSDKVGPIAIRDTSPDLLREIDEEVRRIITEQYEKAKAIVEEYKEPLKAV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WW0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161374 for 2509 contacts (-64.3/contact) +
2D Compatibility (PS) -34999 + (NN) -14424 + (LL) 13356
1D Compatibility (HY) -22800 + (ID) 7600
Total energy: -227841.0 ( -90.81 by residue)
QMean score : 0.538
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