Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------MKSNFQYSTL--ENIPKAFDILKDPPKKLYCVGDIKLLEA-PLK-VAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGVDIIAQENALPK-TIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEY-EKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSGSMSSARLAQKYQKPLFVLPQRLN--ESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAYLKF--------GDKLLEYELLGKIKRINHLVVLA |
| 3MAJ Chain:A ((13-381)) | GTTVLTEAQRIDWMRLIRAENVGPRTFRSLINHFGSARAALERLPELARRGGAARAGRIPSEDEARREIEAGRRIGVELVAPGETGYPTRLATIDDAPPLLGVHALPEALAVMARPMIAIVGSRNASGAGLKFAGQLAADLGAAGFVVISGLARGIDQAAHRASLSSGTVAVLAGGHDKIYPAEHEDLLLDIIQTRGAAISEMPLGHVPRGKDFPRRNRLISGASVGVAVIEAAYRSGSLITARRAADQGREVFAVPGSPLDPRAAGTNDLIKQG-ATLITSASDIVEAVASILEGEPDTGDRTRILALLGPSPVGIDDLIRLSGISPAVVRTILLELELAGRLERHGGSLVSL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108951 for 2218 contacts (-49.1/contact) +
2D Compatibility (PS) -28776 + (NN) -8611 + (LL) 120
1D Compatibility (HY) -6000 + (ID) 3100
Total energy: -155318.0 ( -70.03 by residue)
QMean score : 0.433
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