Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEDRLSAEDKKFLEVERALKEAALNPLRHATEELFGDFLKMENITEICYNGDKVVWVLKNNGEWQPFDVRNKKAFSLSRLMHFARCCASFKKKTIDNYENPILSSNLAN--GERVQIVLSPVTVNDETISISIRIPSKTTYPHSFFEEQGFYNLLDNKEQAISAIKDGIAIGKNVIVCGGTGSGKTTYIKSIMEFIPKEE--RIISIEDTEEIVFKHHKNYTQL--FFGGNITSADCLKSCLRMRPDRIILGELRSSEA-YDFYNVLCSGHKGTLTTLHAGSSEEAFIRLANMSSSNSAARNIKFESLIEGFKDLIDMIVHINHHKQCDEFYIKHR |
| 2EWV Chain:A ((16-283)) | ---------------------------------LEIIKEAIELGASDIHLTAGAPPAVRID-GYIKFLKDF--PRLTPEDTQKLAYSVMSEKHRQKL-EENGQVDFSFGVRGVGRFRANVFYQRG---SVAAALRSLPAEIPEFKKL---GLPDK---------VLELCHRKMGLILVTGPTGSGKSTTIASMIDYINQTKSYHIITIEDPIEYVFKHKKSIVNQREVGEDTKSFADALRAALREDPDVIFVGEMRDLETVETALRAAETGHL-VFGTLHTNTAIDTIHRIVDIFPLNQ------QEQVRIVLSFILQGIISQRLLPKIGGGRVLAY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145035 for 1982 contacts (-73.2/contact) +
2D Compatibility (PS) -27810 + (NN) -10155 + (LL) 4128
1D Compatibility (HY) -1200 + (ID) 2700
Total energy: -182772.0 ( -92.22 by residue)
QMean score : 0.356
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