Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNRGVVLLDGQALAYNIEKDLKNKIQIITA-QTHKRPKLAVILVGKDPASITYVNMKIKACQRVGMDFDLKTLKENITEAELLSLIKDYNTDQNISGILVQLPLPR--SIDTKMILEAIDPNKDVDGFHPLNIGKLCTQK--ESFLPATPMGVMRLLEHYHIEIKGKDVAIIGASNIIGKPLSMLMLNAGASVSVCHILTKDISFYTKNADIVCVGVGKPDLIKASMLKKGAVVVDIGINHLNDGRIVGDVDFINAQKIAGFITPVPKGVGPMTIVSLLENTLIAFEKQQRKGF |
| 1A4I Chain:A ((2-296)) | ---APAEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGINY----KVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAKRFLE--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1A4I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -209470 for 2457 contacts (-85.3/contact) +
2D Compatibility (PS) -29991 + (NN) -8922 + (LL) -140
1D Compatibility (HY) -21600 + (ID) 5000
Total energy: -275123.0 ( -111.98 by residue)
QMean score : 0.544
|
|
|