Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDFKVPPKAKGFKRLFKALFYSKDGLKCAWAEESAFRQIVILALFCIVLASYLTKDFLEWGLLILPCFLSVVIELINSSIEKAVDFTGTEFHPLAKKAKDMASSAQLIGLIFWAFIWGRYLLTLYFN
3ZE3 Chain:B ((33-121))
-----------------------------AWINEAAFRQEGVAVLLCVVIAAWLDVDAVTRVLLISSVMLVMIVELLNSAIEAVVDRIGSEYHELSGRAKDLGSAAVLIAIIDAVITWAILLWSHFG-
General information:
TITO was launched using:
RESULT:
Template:
3ZE3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53738 for 513 contacts (-104.8/contact) +
2D Compatibility (PS) -9402 + (NN) -5558 + (LL) 1436
1D Compatibility (HY) -9600 + (ID) 1900
Total energy: -78762.0 ( -153.53 by residue)
QMean score : 0.426
(partial model without unconserved sides chains):
PDB file :
Tito_3ZE3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZE3-query.scw
PDB file :
Tito_Scwrl_3ZE3.pdb
: