Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKALKILSVGALLFVALNAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKK-----RMEKMPEDKRKAFHKQLHE----YATKNTDKMTVADFEARQKAIKEALKKGNMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSDKH |
2YVY Chain:A ((52-123)) | ----------------------LTLLPKAKAAEVLSHLSPEEQAEYLKTLPPWRLREILEELSLDDLADALQAVRKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YVY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 1918 for 391 contacts (4.9/contact) +
2D Compatibility (PS) -6540 + (NN) -2970 + (LL) 2284
1D Compatibility (HY) -1200 + (ID) 450
Total energy: -6958.0 ( -17.80 by residue)
QMean score : 0.601
|
|
|