Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIKIQKIHPNALIPKYQTEGSSGFDLHAVEEVVIKPHSVGLVRIGICLSLEVGYELQVRTRSGLALNHQVMVLNSPGTVDNDYRGEIKVILANLSDKDFKVQVGDRIAQGVVQKTYKAEFIECEQLDETSRGSGGFGSTGVSKA
2HQU Chain:B ((24-162))
MQLRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFIDV--GAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQALDDTERGSGGFGSTGKN--
General information:
TITO was launched using:
RESULT:
Template:
2HQU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70558 for 892 contacts (-79.1/contact) +
2D Compatibility (PS) -14743 + (NN) -2355 + (LL) 260
1D Compatibility (HY) -8400 + (ID) 2600
Total energy: -98396.0 ( -110.31 by residue)
QMean score : 0.535
(partial model without unconserved sides chains):
PDB file :
Tito_2HQU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HQU-query.scw
PDB file :
Tito_Scwrl_2HQU.pdb
: