Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGYASKLALKICLVGLCLFSTLGAEHLEQKGNYIYKGEEAYNNKEYERAASFYKSAIKNGESLAYILLGIMYENGRG--VPKDYKKAVEYFQKAVDNDIPRGYNNLGVMYKEGKGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAVVYYKMAADVSSSRAYEGLSESYRYGLGVEKDKKKAEEYMQKACDFDIDKNCKKKNTSSR
3E4B Chain:A ((199-393))-------------------------------------------------LKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA-PGYPASWVSLAQLLYDFP-ELGDVEQMMKYLDNGRAADQPRAELLLGKLYYEGKWVPADAKAAEAHFEKAVGRE-VAADYYLGQIYRRG---YLGKVYPQKALDHLLTAARNGQNSADFAIAQLFSQGKGTKPDPLNAYVFSQLAKAQDTPEANDLATQLEA


General information:
TITO was launched using:
RESULT:

Template: 3E4B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55650 for 1526 contacts (-36.5/contact) +
2D Compatibility (PS) -21170 + (NN) -12970 + (LL) 3204
1D Compatibility (HY) 400 + (ID) 2100
Total energy: -88286.0 ( -57.85 by residue)
QMean score : 0.521

(partial model without unconserved sides chains):
PDB file : Tito_3E4B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3E4B-query.scw
PDB file : Tito_Scwrl_3E4B.pdb: