Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTNGLFKMWGLFLVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGNYQGYDVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTR-TKEREKVVDFANPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFYFTKNYPNIKLLKFEQNTETFLALLNNKAIALAHDNTLLLAWVKQHPEF--KLGIT-SLGDKDVIAPAIKKGNPKLLEWLNNEIDSLISSDFLKEAYQETLEPIYGDGIKPEEIIFE |
| 2YLN Chain:A ((48-280)) | --------------------------------SLIERINNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKL---GVKVEFKETQWDSMMAGLKAGRFDVVANQVGLTSPERQATFDKSEPYSWSGAVLVAHNDSNIKSIADIKGVKTAQSLTSNYGEKAKA--AGAQLVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGVKIVWSAPADEKVGSGLIVNKGNDEAVAKFSTAINELKADGTLKKLGEQFFGKDISVQ--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YLN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109623 for 1903 contacts (-57.6/contact) +
2D Compatibility (PS) -24481 + (NN) -11383 + (LL) 2724
1D Compatibility (HY) -2400 + (ID) 2400
Total energy: -147563.0 ( -77.54 by residue)
QMean score : 0.529
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