Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKVVGEIKLQIPAGKANPSPPVGPALGQRGVNIMEFCKAFNERTKDMGSFNIPVIITVYQDKSFTFITKKPPVTDLIKKASGVEKGSDNPLKNKIAKLTHKQVEEIAQLKMEDLNTSTMEAAKKIVMGSARSMGVEVVD
3CJS Chain:B ((1-72))
-MKKVVAVVKLQLPAGKATPAPPVGPALGQHGANIMEFVKAFNAATANMGDAIVPVEITIYADRSFTFVTKTP--------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3CJS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51602 for 499 contacts (-103.4/contact) +
2D Compatibility (PS) -8314 + (NN) -8560 + (LL) 5148
1D Compatibility (HY) -7200 + (ID) 2400
Total energy: -72928.0 ( -146.15 by residue)
QMean score : 0.816
(partial model without unconserved sides chains):
PDB file :
Tito_3CJS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CJS-query.scw
PDB file :
Tito_Scwrl_3CJS.pdb
: