Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEDYAISLEEV--N----FNDFIVVDVRELDEYEELHLPNATLISVN-DQEKL-------AD-F--LSQHKDQKVLLHCRAGRRALDAAKSMHELGYT-PYYLEGNVYDFEKYGFRMVYDDTSLSDKKN
3D1P Chain:A ((21-137))
--NIQSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPASINVPYRSHPDAFALDPLEFEKQIGIPKPDSAKELIFYCASGKRGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKLDL---------
General information:
TITO was launched using:
RESULT:
Template:
3D1P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43709 for 723 contacts (-60.5/contact) +
2D Compatibility (PS) -10810 + (NN) -2357 + (LL) 484
1D Compatibility (HY) -4800 + (ID) 1050
Total energy: -62242.0 ( -86.09 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_3D1P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D1P-query.scw
PDB file :
Tito_Scwrl_3D1P.pdb
: