Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSNKKSNHLRAIYRALVIAIGLAVIIVFNYFNRKNNNARSSRRACSCFFSLTGVNLEKIGSFDTGAKLIVLNHQSLLDIIYLEAYHPSNICWIAKKELGEIPFYGHALTDTGMILIDREDKKGIVSLLKACKEKLDQNRPLVIFPEGTRGKGGEKFLPFKQGAKIIAEKFQLKIQPMVLINSIKIFNSKPLEAYKARTRLVMLESYTPDFSSPTWYEELQERMQKEYLKHYHELNA-- |
| 1BG6 Chain:? ((4-187)) | -------SKTYAVLGLGNGGHAFAAYLALK----------------GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSD----------------IGLAVKDADVILIVVP-AIHHASIAANIASYISEGQLIILNPGATG------------GALEFRKILRENGAPEVTIGET---SSMLFTCRSERPGQVTVNAIKGAMDFACLPAAKAGWALEQIGSVLPQYVAVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BG6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162199 for 1599 contacts (-101.4/contact) +
2D Compatibility (PS) -19355 + (NN) -4583 + (LL) 2636
1D Compatibility (HY) 0 + (ID) 1100
Total energy: -184601.0 ( -115.45 by residue)
QMean score : 0.360
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