Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSVYEKGNALDKRVLEEWLLSEDILMENAAMALERAVLQNASLGAKVIILCGSGDNGGDGYTLARRLVGRFKTLVFEMKLAKSPMCQLQKERAKKVGVVIKAWEEKNEDLECDVLVDCVVGSAFKGGLEPFLDFESLSQKARFKIACDIPSGIDSKGRVDKRAFKADTTISMGAIKSCLLSDKAKDYIGELKVGHLGVFNQIYEIPTDTFLLEKSDLKL-PLRDRKNAHKGDYGHAHVLLGK--HSGAGLLSALSALSFGSGVVSIQALECEITSNNKPLELVFCENF----------PKKLSAFALGMGLENIPKDFKKWLE---L-APCVLDAGVFYHKEVLQALEKEVILTPHPKEFLSLLKSVGINISMLELLDNKLEIARDFSQKYPKVVLLLKGANTLIAH-QGRVFINNLGSVALAKAGSGDVLAGLIVSLLSQNYTPLDAAINASLAHALAGLEFKNH---YALTPLDLIEKIKRL |
| 3RPZ Chain:A ((11-274)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EEHVRATLPERDAESHKGTYGTALLLAGSDDMPGAALLAGLGAMRSGLGKLVIGTSENVIPLIVPVLPEATYWRDGWKKAADAQLEETYRAIAIGPGLPQTESVQQAVDHVLTADCPVILDAGALAKRTYP-KREGPVILTPHPGEFFRMTGV-----PVNELQKKRAEYAKEWAAQLQT-VIVLKGNQTVIAFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCCHEDPKHAVLNAVYLHGACAELWTDEHSAHTLLAHELSDILPRV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RPZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164175 for 2161 contacts (-76.0/contact) +
2D Compatibility (PS) -25818 + (NN) -4491 + (LL) 16128
1D Compatibility (HY) -9200 + (ID) 3650
Total energy: -191206.0 ( -88.48 by residue)
QMean score : 0.587
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