Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFSKLIGLFSHDIAIDLGTANTIVLVKGQGIIINEPSIVAVRMGLFDS--------KAYDILAVGSEAKEMLGKTPNSIRAIRPMKDGVIADYDITAKMIRYFIEKAHKRKTWIRPRIMVCVPYGLTSVERNAVKESALSA--------------GAREVFLIEEPMAAAIGAGLPV---KEPQGSLIVDIGGGTTEIGVISLG--GL--VISKSIRVAGDKLDQSIVEYIRKKFNLLIGERTGEEIKIEIGCAIKLDPPLTMEVSGRDQVSGLLHTIELSSDDVFEAIKDQVREISSALRSVLEEVKPDLVRDIVQNGVVLTGGGALIKGLDKYLSDMVKL-PVYV-GDEPLLAVAKGTGEAIQDLDLLSRVGFSE |
| 2FSJ Chain:A ((21-344)) | ----------MVVVGLDVGYGDTKVIGVD-GKRIIFPSRWAVTETESW-KIPVLSTDGGQTKFIYGKYASGN--------NIRVPQGDGRLASKEAFPLIAAALWESGIHN--PVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAKETGFVVPFDLAQEALSH----P-------VMFRQ--------KQVGG-PEVSGPILEDLANRIIENIRLNLRGE-----VDRVT-SLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAERS---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FSJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144793 for 2383 contacts (-60.8/contact) +
2D Compatibility (PS) -30582 + (NN) -6226 + (LL) 2860
1D Compatibility (HY) 0 + (ID) 2600
Total energy: -181341.0 ( -76.10 by residue)
QMean score : 0.400
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