Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKIAKTAIISPKAEIGKGVEIGEFCVIGDGVKLDEGVKLHNNVTLQGHTFIGKNTEIFPFAVLGTQPQDLKYKGEYSELMVGEDNLIREFCMINPGTEGGIKKTLIGDKNLLMAYVHVAHDCVIGSHCILANGVTLAGHIEIGDYVNIGGLTAIHQFVRIAKGCMIAGKSALGKDVPPYCTVEGNRAFIRGLNRHRMRQL-LESKDIDFIHALYKRLFRPIPSLRES-AKLELEEHANNPFVKEICSFILESSRGVAYKSSEYSSEEKQEE
4R37 Chain:A ((22-273))
---ISPLAYIHPEAKIGENVEIAPFVYIDRNVVIGDNNKIMANANILYGSRIGNGNTIFPGAVIGAIPQDLKFKGEESTAEIGDNNLIRENVTINRGTAAK-GRTIVGNNNLLMEGVHVAHDALIGNGCIVGNSTKMAGEIIIDDNAIISANVLMHQFCRVGGYVMIQGGCRFSKDIPPYIIAGREPIAYSGINIIGLRRRGFSNEIIENIHNAYRIIYQSGLNTSDALTKVEAEVPA-SPEIEYIVDFIRNSERGIIR-------------
General information:
TITO was launched using:
RESULT:
Template:
4R37.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -232433 for 2153 contacts (-108.0/contact) +
2D Compatibility (PS) -26983 + (NN) -4292 + (LL) 1144
1D Compatibility (HY) -17600 + (ID) 4750
Total energy: -284914.0 ( -132.33 by residue)
QMean score : 0.500
(partial model without unconserved sides chains):
PDB file :
Tito_4R37.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4R37-query.scw
PDB file :
Tito_Scwrl_4R37.pdb
: