Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNLENLDWKNLGFSYIKTDFRFIATYKNGSWSQGELVSENALQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLKACAEVIKANQKWLAPYKSGASLYLRPFVIGVGDNLGV-KPASEYLFIVFCAPVGAYFKGGIEKGGARFITTAFDRAAPKGTGGVKVGGNYAASLLAHKIATEQGYDDCIYLDPTTHTKIEEVGAANFFGI-THDDAFITPHSPS----ILPSVTRKSLMVLAKEHLKLKVEEREILIDEL------GAFKEAGACGTAAIITPIKEIAHNNKSY---SFEAPGNITKQLYDLLLSIQQGEQEAPKDWIFEVG |
| 5BWX Chain:B ((32-369)) | -----------LVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWV-PDAAGTSLYVRPVLIGNEPSLGVSQPTRALLFVILC-PVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGPDH-QLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHIPTMENGPELILRFQKELKEIQYGIRA--HEWMFPV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5BWX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143744 for 2574 contacts (-55.8/contact) +
2D Compatibility (PS) -34846 + (NN) -12432 + (LL) 600
1D Compatibility (HY) -28400 + (ID) 5350
Total energy: -224172.0 ( -87.09 by residue)
QMean score : 0.507
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