Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRFGLNIDHIVTLREVRKTYEPEILEALFIAKNTHKVDLITIHLREDKRHIQNEDVLRLLEISPLPINIECSINAEITDFLCSLKNKPSKVTIVPENRNEVTTEGGLDCSLK--GLEEVIRAYHNKGIEVSLFVDPLKDALHFAKEHQVKQVEFHTGVYANLHNALYSNANNQIHAISTLKDKCPKELKEELHNAFLQLRRMSKEAFF---MGIVVCAGHGLNYSNVKELLKIPSLRELNIGHSVVSKAVLVGLEKAILEMAQLIKR
1M5W Chain:C ((6-238))--LGVNIDHIATLRNARGTAYPDPVQAAFIAEQA-GADGITVHLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEM--LAIAVETKPHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTGCYADA--------------------KTDAEQAQELA-------RIAKAATFAASLGLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAIIGRAVMTGLKDAVAEMKRLMLE


General information:
TITO was launched using:
RESULT:

Template: 1M5W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -151114 for 2007 contacts (-75.3/contact) +
2D Compatibility (PS) -25030 + (NN) -15385 + (LL) 2252
1D Compatibility (HY) -15200 + (ID) 4900
Total energy: -209377.0 ( -104.32 by residue)
QMean score : 0.607

(partial model without unconserved sides chains):
PDB file : Tito_1M5W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1M5W-query.scw
PDB file : Tito_Scwrl_1M5W.pdb: