Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLPVFICEDNRMQRERLTKYIEDYIMVEHFDMKLELSTGDPFELVSRMPTHQGM-GLYFLDIDLGQPDMNGFELAQEIRKFDPRGFIIFITTHAELSYMTFTYKVEALDYIIKDDIDL-LHDRVLACMKQAEERISNDQDMQKYFTFKVSDKKIIHELLDDILFFETAPTIHKVILHGKNRQVEFYGKLKNIEKMLDESFYRCHRSYIVNKKNIHELDTTKGVVKMSNGENCYASSKLIKSLSL
2QV0 Chain:A ((58-176))
-MKVIIVEDEFLAQQELSWLINTH-S--QMEI--VGSFDDGLDVLKFLQ--HNKVDAIFLDINI--PSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFE--LEAFDYILKPYQESRIINMLQKLTTAW-----------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2QV0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101013 for 896 contacts (-112.7/contact) +
2D Compatibility (PS) -12812 + (NN) -7628 + (LL) 9340
1D Compatibility (HY) -11600 + (ID) 1600
Total energy: -125313.0 ( -139.86 by residue)
QMean score : 0.574
(partial model without unconserved sides chains):
PDB file :
Tito_2QV0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QV0-query.scw
PDB file :
Tito_Scwrl_2QV0.pdb
: