Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTRVMYPAEIKEKAIKMKLA--GKSTKEIMRTLNIKNPTQVKTWWRWYRNEETHRFHQGVGKQYKYQKGVPELPEIEQLKIALRQKELELEILKKYKALERK
1HLV Chain:A ((3-52))
-PKRRQLTFREKSRIIQEVEENPDLRKGEIARRFNIP-PSTLSTILKNKRAI---------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1HLV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3373 for 263 contacts (-12.8/contact) +
2D Compatibility (PS) -5337 + (NN) -2232 + (LL) 4704
1D Compatibility (HY) 0 + (ID) 550
Total energy: -6788.0 ( -25.81 by residue)
QMean score : 0.658
(partial model without unconserved sides chains):
PDB file :
Tito_1HLV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HLV-query.scw
PDB file :
Tito_Scwrl_1HLV.pdb
: