Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDKSVPHISVIMVNHDATNYPEFHLPAGYSFCFYKDGLEEDWCRLQLETGQVLSMDSIRARFETEFGNEKEKLTKRCIFVKAPNGEIIGTAMLWDGNTF-----GKIESRIHWVAVLDSHGGKGIAKALLSKILGL---NKSKFVYLTTQTGSYQAIYLYRKFGFEKYVGKTPENWKTVNFQEEKETAWQIIENKIAEHQA
1S3Z Chain:A ((19-159))
---------------------------SHMDIRQMNKTHLEHWRGLRKQLWPGHPDDAHLADGEEILQ-----ADHLASFIAMADGVAIGFADASIRHDYVNGCDSSPVVFLEGIFVLPSFRQRGVAKQLIAAVQRWGTNKGCREMASDTSPENTISQKVHQALGFEETERVI-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1S3Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83212 for 913 contacts (-91.1/contact) +
2D Compatibility (PS) -15071 + (NN) -8493 + (LL) 4564
1D Compatibility (HY) 2400 + (ID) 1100
Total energy: -100912.0 ( -110.53 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_1S3Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S3Z-query.scw
PDB file :
Tito_Scwrl_1S3Z.pdb
: