Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------------------------------------------------------------------------------------------------MSDYLVKALAYDGMARVYAAVTTETIKEAQRRHDTWSVSSAALGRTMTGTLFLGAMQKEDQKITVKIEGDGPIGPIVADSNAQGQIRGYVTNPHVHFSELNEAGKLDVRRGVGTSGMLSVVKDLGFGENFTGQTPIVSGEIGEDFTYYLATSEQINSSVGVGVLVNPDDTIEAAGGFMLQLLPGATDEII-DEIEKNLMALPTVSRMIEAGETPESILAKLAGGEDKLQILEKIPVSFECNCSKERFGSAIISLGKEEIRSMIEEDHGAEAECHFCRNTYDFSEEELKTLYEEAK----------------------------------------------------------------------------------------- |
| 4NNB Chain:A ((4-527)) | TSLYITAAPIGAVPKFLDPFEATFIPSFLLEGFFDADRCASIAADLKTDGWEVVPAGGRLLQVGHAQPIAHFPKPWLAALSNKLARRIVLQLTTYGWIVSEQGDLLWEHERQHHYLPPALIEAIEKESPALLKNMEEAGWIACAAGYWQAGKARSPYLPITPEAITEETIRSMRAGAAVVHLHTRDLSDRRRIEIP----GLGVVTVGS----------QRNQIVLDDYDAIVPMVKKREPAA-----ILNLSTSVRGDRHGARSKLRRA-----------HLKFYDD-VGSAPEVASLSPAAVVFQ-----------GGGGYDNAPDFLDAQFDHFERVGTRPEVEVFNHAIVDNATSLY-RDRLLRTGK---PVLFMLVAGVD---QYRRDPIT-----GEVEDDSLIARVVREEISSLLADES---ADSH--RRAVELAIGQLRPVVERLRASFPVSKISILLPGPMQNLLVDVALGLGLDGIRVGLEDGLTVNDARVPGGVRKARGTWEQVSLVREELLGRGATILTAAQVRDMFGLGI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NNB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 18770 for 1681 contacts (11.2/contact) +
2D Compatibility (PS) -24784 + (NN) -2080 + (LL) 4096
1D Compatibility (HY) -6800 + (ID) 2400
Total energy: -13198.0 ( -7.85 by residue)
QMean score : 0.188
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