Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------------MKKKTSLACSEC---GSRNYTVNVSGTQKETRLEVKKFCRHCNKHTLHRETK-----------------------
1I35 Chain:A ((1-95))
CILRFIACNGQTRAVQSRGDYQKTLAIALKKFSLEDASKFIVCVSQSSRIKLITEEEFKQICFNSSSPERDRLIIVPKEKPCPSFEDLRRSWEIE
General information:
TITO was launched using:
RESULT:
Template:
1I35.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2084 for 280 contacts (7.4/contact) +
2D Compatibility (PS) -5074 + (NN) -240 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 350
Total energy: -6380.0 ( -22.79 by residue)
QMean score : 0.198
(partial model without unconserved sides chains):
PDB file :
Tito_1I35.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I35-query.scw
PDB file :
Tito_Scwrl_1I35.pdb
: