Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKNTPEALIDLFEELKNLFETDTSLNNQNSSRLQEILTTATIRVRKASQTVELEARSVFQNIHTLCFVEKIHLNPEEANVLKEIEKIALSKGFWGGMNTLNVTNQFPSN------
1XEE Chain:A ((31-121))
-NSGLPTTLGKLDERLRNYLKKGT----KNSAQFEKMVILTE---NKGYYTVYLNTP-----------------LAEDRKNVELLGKMYKTYFFKKGESKSSYVINGPGKTNEYAY
General information:
TITO was launched using:
RESULT:
Template:
1XEE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8610 for 570 contacts (15.1/contact) +
2D Compatibility (PS) -9085 + (NN) -3994 + (LL) 2476
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -5693.0 ( -9.99 by residue)
QMean score : 0.330
(partial model without unconserved sides chains):
PDB file :
Tito_1XEE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XEE-query.scw
PDB file :
Tito_Scwrl_1XEE.pdb
: