Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKPLVGINMKNYINTRAQTSEWLEATIPLLGNFSDVDTFIFPSMGTLETTANLLAGTSFGFGPQNMAPEKSGPLTGEFSVESIIDLSANYVEIGHAERKNLFHEKTSEIAKKIQLALDEKITPVVCVGEGIRANDTNELKNALKKQIEALFDTIQVTQFKNVVLAYEPEWAIGKANSADTDYIESAHQALREIIRELGGDETL--VRIIYGGSVSKENAAEIVRQKNVDGLFVGRFGHKPQNFADIVSIVSKTKG
5BMX Chain:D ((35-244))----------------------------------SKLDVVVFPVSVHYDHTRKLLQ-SKFSTGIQNVSKFGNGSYNGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQ-KTIEVITKQVKAFVDLID--NFDNVILVYEPLWA------ATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLK-ESFVDII--------


General information:
TITO was launched using:
RESULT:

Template: 5BMX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112156 for 1551 contacts (-72.3/contact) +
2D Compatibility (PS) -22073 + (NN) -13574 + (LL) 2764
1D Compatibility (HY) -16800 + (ID) 3650
Total energy: -165489.0 ( -106.70 by residue)
QMean score : 0.513

(partial model without unconserved sides chains):
PDB file : Tito_5BMX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5BMX-query.scw
PDB file : Tito_Scwrl_5BMX.pdb: