Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKGLKKMKYSIQFSDAIHILAYIEIF--KNTNLLS-SEIIAGSVKTNPANIRRIMSNLKKANLITTQTGKAN-PILTKPPEEISLLDVYKSIEGNTNLIHVDPKTNPDCIVGANIQQVLSSKYELLQQKIELEMDEIKLDSIIHDISVLESKDRPQNNEFITKFL
3EDP Chain:A ((15-82))
---------------ASKIKDSINRDEYKTG--MPNETALQEIYSSSRTTIRRAVDLLVEEGLVVRKNG-VGLYVQPKL--------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3EDP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33649 for 316 contacts (-106.5/contact) +
2D Compatibility (PS) -5856 + (NN) -329 + (LL) 7256
1D Compatibility (HY) -1200 + (ID) 550
Total energy: -34328.0 ( -108.63 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_3EDP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EDP-query.scw
PDB file :
Tito_Scwrl_3EDP.pdb
: